miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|188340636|gb|EY758043.1|EY758043 CCACGCGTCCGAATGTTCCGACAATGGTGATAGAAGGGGAACATGAAATAGAACGGCAGGCTGAAAATCAGACGTTTGCT
GCTTACAGTTCCCGTTTTGCATTTCCATCTGAAGAAAGTGGATCATCATCTTCACTCTACTATTCTTTTAATGCAGGAGG
CATACATTTTGTGATGCTTAGTGCTTATATTGACTATGACAAATCATATCAATACAAGTGGCTGGAAAGCGACCTGGGTG
ATATTGACAGAGAAGTGACTCCTTGGTTGATAGCTGCCTGGCATCCTCCTTGGTACAGTACCTACTCAGCACACTATAGA
GAAGTAGAGTGTATGAGAGTGGAGATGGAGGACTTACTGTATCACTATGGTGTTGACATAGTTTTCAATGGGCATGTTCA
TGCCTATGAGAGGTCAAATCGTGTTTACAACTATTCTTTGGATCCATGTGGCCCAGTTTACATACTGGTTGGTGATGGAG
GAAATGTAGAAGGCCTGGATATAGTACATGCTGATGAACCTGGGAACTGTCCAGAGCCATCTACAACACCAGATATGGGT
GGCTCCTGTGCATTTAACTTTACATCAGGCCCCGCATCTGGGAAGTTTTGCTGGGACCGGCAGCCTGACTATAGTGCATA
CAGGGAAAGCAGCTTTGGCCATGGAATTTTAGAGGTGAAGAACGAGACTCATGCATTATGGTCGTGGCACCGTAATCAGG
AATTCTACGAGATTGCTGGTGATATTATTTACATAGTAAGGGAACCCAATAGGTGCCCTGNNTCACAAAGTAATTGAGCT
TTGGGGATATGGCATACCACTGTTATAAAATGGAACTGTGAACCCAAACACAGGGCGATATGGGCCAATATACATGATCG
TCTAATTGGAGAGCATATA




Most similar to sp|Q9SFU3|PPA15_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9SFU3|PPA15_ARATH Purple acid phosphatase 15 OS=Arabidopsis
            thaliana GN=PAP15 PE=1 SV=1
          Length = 532

 Score =  391 bits (1004), Expect = e-108
 Identities = 184/258 (71%), Positives = 205/258 (79%), Gaps = 3/258 (1%)
 Frame = +3

Query: 15   VPTMVIEGEHEIERQAENQTFAAYSSRFAFPXXXXXXXXXXXXXFNAGGIHFVMLSAYID 194
            VP MVIEG HEIE QAEN+TF AYSSRFAFP             FNAGGIHFVML AYI 
Sbjct: 269  VPLMVIEGNHEIELQAENKTFEAYSSRFAFPFNESGSSSTLYYSFNAGGIHFVMLGAYIA 328

Query: 195  YDKSY-QYKWLESDLGDIDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYHYG 371
            YDKS  QY+WL+ DL  +DR VTPWL+A+WHPPWYS+Y+AHYRE ECM+  ME+LLY YG
Sbjct: 329  YDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYTAHYREAECMKEAMEELLYSYG 388

Query: 372  VDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTP 551
             DIVFNGHVHAYERSNRVYNY LDPCGPVYI++GDGGN E + I HAD+PG CPEP TTP
Sbjct: 389  TDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKMAIEHADDPGKCPEPLTTP 448

Query: 552  D--MGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEVKNETHALWSWHRNQEF 725
            D  MGG CA+NFT    S KFCWDRQPDYSA RESSFGHGILE+KNET ALW+W+RNQ+ 
Sbjct: 449  DPVMGGFCAWNFT---PSDKFCWDRQPDYSALRESSFGHGILEMKNETWALWTWYRNQDS 505

Query: 726  YEIAGDIIYIVREPNRCP 779
                GD IYIVR+P+RCP
Sbjct: 506  SSEVGDQIYIVRQPDRCP 523